miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Arachis duranensis, Arachis hypogaea, Arachis ipaensis, Glycine soja, Glycyrrhiza uralensis, Lotus japonicus, Medicago sativa, Phaseolus acutifolius, Phaseolus coccineus, Pisum sativum, Trifolium pratense, Cajanus cajan, Cicer arietinum, Glycine max, Vigna unguiculata, Medicago truncatula, Phaseolus vulgaris



ABOUT THIS RECORD

ID: MNEST000086
species: Arachis duranensis
miRNA family: miR166m
source: miRNEST

Taxonomy by NCBI:
Arachis duranensis Arachis Dalbergieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GGAATGTTGGCTGGCTCGAGG

miRNA*
 TCGGACCAGGCTTCATTCCCC

mismatches: 2
bulges: 2
View larger
pre-miRNA
 TTGTTGTTGAGGGGAATGTTGGCTGGCTCGAGGCTTTTCACAAAATGAAGGTTCTCACTCACTCACTCATCATATTTTGGGAGATGAAGTAGTAGAACTA
TTAAGGCTTCGGACCAGGCTTCATTCCCCTCAAAATAT

dot-bracket secondary structure
......((((((((((((..((((((.(((((((((((((.....))).((((((.(((.((((((((.(((.....)))))).)).)))))))))))).
..)))))))))).))).))).)))))))))))).....


SIMILARITIES
miRBase ptc-MIR166f: 0.0000000000005

PMRD ptc-miR166f: 0.0000000000005

microPC miR166: 0.0000000000005		UniProt no hits

RFAM mir-166: 0.00000000003		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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