miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Guizotia abyssinica, Helianthus argophyllus, Helianthus ciliaris, Helianthus exilis, Helianthus paradoxus, Helianthus petiolaris, Helianthus tuberosus, Parthenium argentatum, Zinnia violacea, Helianthus annuus

ABOUT THIS RECORD

ID: MNEST000876
species: Helianthus petiolaris
miRNA family: MIRf1138
source: miRNEST

Taxonomy by NCBI:
Helianthus petiolaris Helianthus Heliantheae Heliantheae alliance Asteroideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms

SEQUENCE & STRUCTURE

miRNA
TTCTACATGTGCATACCAACT

miRNA*
TTGGTTATGTTTATGGTGGAGTG

mismatches: 2
bulges: 2

View larger

pre-miRNA
GGCTGGGAATATTCTACATGTGCATACCAACTGGAATTGCTGTTGGTTATGTTTATGGTGGAGTGGTCGGTGG

dot-bracket secondary structure
.(((((...(((((((((((.((((((((((.((.....))))))).))))).))).)))))))).)))))..

SIMILARITIES

miRBase no hits

PMRD no hits

microPC no hits

UniProt no hits

RFAM no hits

most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record