miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Glycine soja, Phaseolus acutifolius, Phaseolus coccineus, Cajanus cajan, Glycine max, Vigna unguiculata, Phaseolus vulgaris



ABOUT THIS RECORD

ID: MNEST008925
species: Phaseolus vulgaris
miRNA family: MIR414
source: miRNEST

Taxonomy by NCBI:
Phaseolus vulgaris Phaseolus Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCTTCATCATCATCATCTTCT

miRNA*
 ATTTGACAGTGGTAAGGAGA

mismatches: 5
bulges: 1
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pre-miRNA
 TTATGTCATCTTCATCATCATCATCTTCTTCTGTATCACTACCATCCTTATTTTCTTCAAAAATATGTTTTCTCTTGTATGGTTGGTCAAAGGGAAACCT
TCCATCAATTGGTGACACTAAGTTAATTACAGCCGTAAGAAGAGATCCAGTCATGGTGAGAATAGTGAACAGAGATTTGACAGTGGTAAGGAGAGTATG

dot-bracket secondary structure
........((((.(((((..(((...(((.((((.((((((...........((((.((....((((...((((((.((((((((((((((((....)))
)(((.....)))))))..(((.....)))))))))))..))))))......)))).)))))))))))))))))))..)))..))))).)))).......


SIMILARITIES
miRBase ppt-MIR414: 0.0002

PMRD ppt-miR414: 0.0002

microPC no hits		UniProt no hits

RFAM mir-598: 0.0002		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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