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Species belonging to selected taxon:

Ipomoea nil



ABOUT THIS RECORD

ID: MNEST008942
species: Ipomoea nil
miRNA family: MIRf592
source: miRNEST

Taxonomy by NCBI:
Ipomoea nil Ipomoea Ipomoeeae Convolvulaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GGCGAGTTGTCCTTGGCTACA

miRNA*
 CAGCCAAGGATGACTTGCCGG

mismatches: 1
bulges: 0
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pre-miRNA
 ACATAATCTCATCAATGGCCTTGCATGTTGGCGCAGGAAGCAGGTGGATGCAGCCAAGGATGACTTGCCGGCCGGTGAACTCTTCCTCCTATTGCGGCGG
ACCCAACCATATATCCACCGCTCCGTACACTCTCAGGGTGACGAAAAGTTTGTAAGTTGGCGAGTTGTCCTTGGCTACATCTTCCTGTCTGCCCTTCAAG
CCAGGCTTTGGGTGACATATATACAT

dot-bracket secondary structure
.....((.(((((...(((((.((.((..((.((((...(((((.(((((.(((((((((((((((((((((..(((((((.(((.((.(((.((((.((
(............))).))))...))).((((...)))))).))).)))))))..))))))))))))))))))))).))))).)))))))))))..)).)
).)))))...))))).))........


SIMILARITIES
miRBase osa-MIR169p: 0.0000000008

PMRD osa-miRf11416-akr: 0.0000000008

microPC miR169: 4e-67		UniProt no hits

RFAM MIR169_2: 0.00000001		most similar mature miRNAs

Identical with: miR169 from microPC (MNEST046552)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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