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Species belonging to selected taxon:

Ipomoea nil



ABOUT THIS RECORD

ID: MNEST008944
species: Ipomoea nil
miRNA family: MIR166
source: miRNEST

Taxonomy by NCBI:
Ipomoea nil Ipomoea Ipomoeeae Convolvulaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCGGACCAGGCTTCATTCCTC

miRNA*
 GGGATGTTGGCTGGCTCGATG

mismatches: 2
bulges: 2
View larger
pre-miRNA
 ACGACGAGGAGGAGATATGAGGAGTTTGAGGGGGATGTTGGCTGGCTCGATGCACTTACTTATCATCTTCCTCAAAAACATGCGACATATACATACATAT
GGAAGATCATATATCTATAAATATATATTTGTCTTCCATATCCCATATATATATGTTGATGATGGTGGAGTGATGGCATCGGACCAGGCTTCATTCCTCC
CAAAACACCCATATTTCTATCTGCTCT

dot-bracket secondary structure
......(((.(((((((((.((.((((..((((((((..((((((.(((((((..((((((((((((...............(((((((((.(((.((((
((((((.((.((((.((....)).)))).))))))))))))....))).)))))))))..)))))).))))))..))))))).))).))).)))))))).
..)))).))))))))))).))).....


SIMILARITIES
miRBase mtr-MIR166c: 0.000003

PMRD ini-miR166: 9e-25

microPC miR166: 0.000000003		UniProt no hits

RFAM mir-166: 0.00001		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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