ABOUT THIS RECORDspecies: Rhipicephalus microplus
miRNA family: mir-33
source: miRNEST
Taxonomy by NCBI:
Rhipicephalus microplus Boophilus Rhipicephalus Rhipicephalinae Ixodidae Ixodoidea Ixodida Parasitiformes Acari Arachnida Chelicerata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GTGCATTGTTGTTGCTTTATT miRNA* GGAAGGGACACAGGTGCACAA mismatches: 4 bulges: 0 |
pre-miRNA
ACAACTTGAATCGCATGATATCGAACAGGGCAAGGAAGGGACACAGGTGCACAATACAGCACTGCCCCGTGCATTGTTGTTGCTTTATTGACCTGTTTGA
TTTCACGCCAACCAGTTTG
dot-bracket secondary structure
.(((.(((....((.(((.((((((((((.(((.((((.((((..(((((((................)))))))..)))).)))).))).)))))))))
).))).))....))).)))
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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ACAACTTGAATCGCATGATATCGAACAGGGCAAGGAAGGGACACAGGTGCACAATACAGCACTGCCCCGTGCATTGTTGTTGCTTTATTGACCTGTTTGA
TTTCACGCCAACCAGTTTG
dot-bracket secondary structure
.(((.(((....((.(((.((((((((((.(((.((((.((((..(((((((................)))))))..)))).)))).))).)))))))))
).))).))....))).)))
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
