miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Mus musculus, Sus scrofa, Bos taurus, Rattus norvegicus, Gallus gallus, Canis lupus familiaris, Ovis aries, Macaca fascicularis, Anolis carolinensis, Trichosurus vulpecula, Papio anubis, Homo sapiens, Taeniopygia guttata, Peromyscus maniculatus bairdii, Pongo abelii, Ursus americanus, Equus caballus, Oryctolagus cuniculus, Macaca nemestrina, Cavia porcellus, Bos indicus, Meleagris gallopavo, Lonchura striata domestica, Bos sp., Macropus eugenii, Peromyscus polionotus subgriseus, Capra hircus, Pan troglodytes verus, Macaca mulatta



ABOUT THIS RECORD

ID: MNEST009343
species: Macaca nemestrina
miRNA family: miR-1814c
source: miRNEST

Taxonomy by NCBI:
Macaca nemestrina Macaca Cercopithecinae Cercopithecidae Cercopithecoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GTTTTGTTTTGCTTTGTTTTG

miRNA*
 GGTGAAGCTGAACTAGCAG

mismatches: 3
bulges: 2
View larger
pre-miRNA
 TTTTTCTTATTAGGTGAAGCTGAACTAGCAGAAATTCCAGAAGGCTATATCCCAGAACACTGGGAATATTATAAGGTTTGTATAGGACATTGACAATTAC
ATGCTGTTACGTGCCTTGTCAATGCACTAGTTAATATCTTAATTCAGCAATTATGATATAGTCAGGTTTTTTGTTTTGTTTTGCTTTGTTTTGTTGAGAC
AG

dot-bracket secondary structure
....(((((.((((.(((((.((((.((((((((..((....(((((((((((((....))))))......(((((((((..(((..(((((((((...(
(((......))))..)))))))))..)))..))).))))))..(((.......)))))))))).)).))))))))..)))).)))))..)))).))))).
..


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt sp|Q9CQH3|NDUB5_MOUSE: 0.000001

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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