miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Danio rerio, Ictalurus punctatus, Pimephales promelas, Ictalurus furcatus, Cyprinus carpio, Misgurnus anguillicaudatus, Rutilus rutilus



ABOUT THIS RECORD

ID: MNEST009376
species: Cyprinus carpio
miRNA family: mir-124
source: miRNEST

Taxonomy by NCBI:
Cyprinus carpio Cyprinus Cyprinidae Cyprinoidea Cypriniformes Cypriniphysi Otophysi Ostariophysi Otocephala Clupeocephala Elopocephala Teleostei Neopterygii Actinopteri Actinopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TAAGGCACGCGGTGAATGCCA

miRNA*
 GTGTTCACAGCGGACCTTGAT

mismatches: 4
bulges: 0
View larger
pre-miRNA
 GCAAACAGGCCTGCTTTTCTTCGTGTTCACAGCGGACCTTGATTTAAATTTCCATACAATTAAGGCACGCGGTGAATGCCAAGAAAGATGGCAAATATCA


dot-bracket secondary structure
........(((...(((((((.((((((((.(((..((((((((.............))))))))..))).)))))))).)))))))..)))........



SIMILARITIES
miRBase dre-mir-124-2: 4e-37

PMRD no hits

microPC no hits		UniProt no hits

RFAM mir-124: 3e-35		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record




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