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Species belonging to selected taxon:
Rana catesbeiana
ABOUT THIS RECORD
ID:
MNEST009457
species:
Rana catesbeiana
miRNA family:
mir-154
source:
miRNEST
Taxonomy by NCBI:
Rana catesbeiana
Aquarana
Aquarana/sylvatica group
Novirana
Rana
Raninae
Ranidae
Ranoidea
Neobatrachia
Anura
Batrachia
Amphibia
Tetrapoda
Sarcopterygii
Euteleostomi
Teleostomi
Gnathostomata
Vertebrata
Craniata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GGAGAAAGCATCCTTGGTGTC
miRNA*
TACTCAGTGTTCTCTCCCT
mismatches:
2
bulges:
2
View larger
pre-miRNA
AATGA
TACTCAGTGTTCTCTCCCT
GAGATCTTCCTCAGATAGCTCTCTGTCCAGTTTGCTAGATCTGATCTTTCCCGTATCCTCTTCATCCACCTGAGAA
TTAGCACTCCAGGAGGCAGTGGGCTCTGGGATATTGATTTCT
GGAGAAAGCATCCTTGGTGTC
CC
dot-bracket secondary structure
...((
((((.((((((.(((((..
((((((.(((.((((..((((.(((((.....((((((.(((..............................))).
))))))........))))).)))))))))))....)))))).
))))).))))..)).))))))
..
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
download this record