ABOUT THIS RECORDspecies: Myzus persicae
miRNA family: miR-3533
source: miRNEST
Taxonomy by NCBI:
Myzus persicae Myzus Macrosiphini Aphidinae Aphididae Aphidoidea Aphidomorpha Aphidiformes Sternorrhyncha Hemiptera Paraneoptera Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ATGAAGTGCGATGTGGATTTC miRNA* GACTACATACAATTCCATC mismatches: 4 bulges: 2 |
pre-miRNA
CGGTATCCATGAGACTACATACAATTCCATCATGAAGTGCGATGTGGATTTCGTAAGGACT
dot-bracket secondary structure
.....(((((((((((((((.((.(((......))).))..)))))).))))))..)))..
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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CGGTATCCATGAGACTACATACAATTCCATCATGAAGTGCGATGTGGATTTCGTAAGGACT
dot-bracket secondary structure
.....(((((((((((((((.((.(((......))).))..)))))).))))))..)))..
SIMILARITIES| miRBase gga-mir-3533: 0.000000003 PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
