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Species belonging to selected taxon:

Agrostis stolonifera, Oryza sativa, Avena barbata, Avena sativa, Festuca arundinacea, Festuca pratensis, Hordeum vulgare, Hordeum vulgare subsp. spontaneum, Leymus cinereus x Leymus triticoides, Lolium perenne, Pseudoroegneria spicata, Triticum monococcum, Triticum turgidum subsp. durum, Brachypodium distachyon, Triticum aestivum



ABOUT THIS RECORD

ID: MNEST000952
species: Hordeum vulgare
miRNA family: MIRf341
source: miRNEST

Taxonomy by NCBI:
Hordeum vulgare Hordeum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 ACTCCGTCCCAAAATAAGTGT

miRNA*
 AGTTATTTTGAGACAGAGGGA

mismatches: 4
bulges: 0
View larger
pre-miRNA
 ATGTCAATTCCACTCCGTCCCAAAATAAGTGTCTTAAGCTTAGTACAAATTTATAATAAAGCTAATACAAAGTTGAGACAGTTATTTTGAGACAGAGGGA
GTATATGG

dot-bracket secondary structure
......(((((.(((.(((.((((((((.((((((((.(((.(((....((((...)))).....))).))))))))))).)))))))).))).))))))
))......


SIMILARITIES
miRBase no hits

PMRD osa-miRf10229-akr: 0.00008

microPC miR1439: 7e-30		UniProt no hits

RFAM MIR1122: 8e-30		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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