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ABOUT THIS RECORD

ID: MNEST000021
species: Actinidia deliciosa
miRNA family: MIRf1208
source: miRNEST

Taxonomy by NCBI:
Actinidia deliciosa Actinidia Actinidiaceae Ericales asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CTTGGGTCTAGCAAATTTGTG

miRNA*
 ATAATTTTACCGGACCTAAGCA

mismatches: 5
bulges: 1
View larger
pre-miRNA
 CCACACCTACAATATTCAAGTTTGTTTTTTTAATAATTTTACCGGACCTAAGCACTTTAAAACTTATTTACCAAACCCGAGTACTTTTTTGAAGTCTTGG
GATGAAAAAACAATTTTAGAGCATATCTATTGAAGTTGTATTTTCGTCACACGAGTTTACTGAAAATCGTATTTTCATCCCACGACTTCATGAGAAATCA
TATTTTAGTTCCACGACTTAAAAAAAGTACTCGGGTTTGGCAAAATAAGTTTCGAAGTGCTTGGGTCTAGCAAATTTGTGAAAAAACAACTCGGGTTTGG
TAAAAAAAC

dot-bracket secondary structure
....(((......((((.((((.(((((((((..(((((....(((((((((((((((.((((((((((.((((((((((((((((((.(((((((.(((
((((((((.((.(((((..(((............)))(((..(((((...)))))..)))..))))).)).))))))))))).)))))))(((....)))
..(((.((((....)))).)))))))))))))))))))))..)))))))))).)))))))))))))))...)))))..))))))))))))).))))..))
)........


SIMILARITIES
miRBase no hits

PMRD ptc-miRf11879-akr: 0.001

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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