ABOUT THIS RECORDspecies: Agrostis stolonifera
miRNA family: MIR1122
source: miRNEST
Taxonomy by NCBI:
Agrostis stolonifera Agrostis Agrostidinae Poeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TAGATACATCCGTATCTAGA miRNA* TAGATACSAATGCATCTAGA mismatches: 3 bulges: 0 |
pre-miRNA
CTCCCTTCGAACCAAATTAGTTGACATCACTTTATCTAGATACSAATGCATCTAGATGAATTTTAGTGATAGATACATCCGTATCTAGAWAAAGCTGCST
CAAGTAAATTGGATCGGAGGAA
dot-bracket secondary structure
...(((((((.((((.(((.((((...((((((.(((((((((..(((.(((((.....((....))..))))).)))..))))))))).)))).))..)
))).))).)))).)))))))..
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
Source sequences
download this record
CTCCCTTCGAACCAAATTAGTTGACATCACTTTATCTAGATACSAATGCATCTAGATGAATTTTAGTGATAGATACATCCGTATCTAGAWAAAGCTGCST
CAAGTAAATTGGATCGGAGGAA
dot-bracket secondary structure
...(((((((.((((.(((.((((...((((((.(((((((((..(((.(((((.....((....))..))))).)))..))))))))).)))).))..)
))).))).)))).)))))))..
SIMILARITIES| miRBase far-MIR1122: 0.0000002 PMRD tmo-miR1122: 0.0000009 microPC miR1122: 0.0000009 | UniProt no hits RFAM MIR1122: 0.0000002 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
Source sequences
download this record
