miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

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ABOUT THIS RECORD

ID: MNEST000042
species: Antirrhinum majus
miRNA family: MIR1426
source: miRNEST

Taxonomy by NCBI:
Antirrhinum majus Antirrhinum Antirrhineae Plantaginaceae Lamiales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
AGAATGTTGATGATGATTATA

miRNA*
TGATCTCATCTATTATTCTCT

mismatches: 3
bulges: 2

View larger
pre-miRNA
CATCGCCTCAGGTGATCTCATCTATTATTCTCTCGCTTCGTGTTCCCAAAATACCCCTCCCCCGGAACCCGTATCTACGATAAAACCAGATAACATGGAT
ACTACTGAAAACCCTAATTCGGATTCTCCGGTTTTGGATTCTGTAATGGAACCTGAGGACGAGAATGTTGATGATGATTATAATAACAGTG


dot-bracket secondary structure
.((((((...)))))).(((((...(((((((...(((((.(((((.....(((...(((.(((((....(((((((..................)))))
))..(((((........)))))....)))))....)))....)))..))))).)))))..)))))))..))))).................



SIMILARITIES
miRBase no hits

PMRD no hits

microPC miR1426: 3e-92
UniProt no hits

RFAM no hits
most similar mature miRNAs

Identical with: miR1426 from microPC (MNEST046768)

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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