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ABOUT THIS RECORD

ID: MNEST000045
species: Aquilegia formosa x Aquilegia pubescens
miRNA family: miR3948
source: miRNEST

Taxonomy by NCBI:
Aquilegia formosa x Aquilegia pubescens Aquilegia Ranunculaceae Ranunculales stem eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CGGAGTGGGAGTGGGAGTGGG

miRNA*
TCAGCTGGTGCTCCTGACTTGAC

mismatches: 4
bulges: 2

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pre-miRNA
CATTTAAATCTTTCAGCTGGTGCTCCTGACTTGACGCACTTTTCTATGCATGGAAGGGTCATAGTTCTGCATTTAAGAATGCAACTAACAGCAGGTGGAG
TAGGAGTAGGAGTAGGAGTAGGAGTAGGAGTAGGAGTCGGAGTAGGTGTAGGTGTCGGAGTGGGAGTGGGAGTGGGGGTGGGGAT


dot-bracket secondary structure
........(((.((.(((..((((((((..(((((((.((..(((((...(((.....((.((.((((((.((((....(((..(((.((.....))...
)))..)))....)))).)))))).)).)).......)))..)))))...)))))))))..))))))))..)))...)).)))...



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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