ABOUT THIS RECORDspecies: Aquilegia formosa x Aquilegia pubescens
miRNA family: MIR414
source: miRNEST
Taxonomy by NCBI:
Aquilegia formosa x Aquilegia pubescens Aquilegia Ranunculaceae Ranunculales stem eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCATCATCATCATCATCTATC miRNA* CGATGATGAAGATGATGATG mismatches: 2 bulges: 1 |
pre-miRNA
TTGGATTAAAATTTAACATCACCATCATCATCATCATCATCATCTATCATGACTGCTCAGACTCAAGAAGAGCTCCTCGCTGCTAATCTCGAACAGCAGA
AAATTAATCCTGATGAGCCTGTTGTTGAAGATGAAGAGGATGAAGATGACGATGATGAAGATGATGATGACAAGGATGATGATGAGGTTGAAG
dot-bracket secondary structure
.....((((..((((.(((((((.(((((((((((.((((((((..((((..((((((...........))))(((((.......((((..((((((((.
..((((....))))....))))))))..))))...)))))...)))))).)))))))).)))))))))))...)).))))).)))).))))..
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
TTGGATTAAAATTTAACATCACCATCATCATCATCATCATCATCTATCATGACTGCTCAGACTCAAGAAGAGCTCCTCGCTGCTAATCTCGAACAGCAGA
AAATTAATCCTGATGAGCCTGTTGTTGAAGATGAAGAGGATGAAGATGACGATGATGAAGATGATGATGACAAGGATGATGATGAGGTTGAAG
dot-bracket secondary structure
.....((((..((((.(((((((.(((((((((((.((((((((..((((..((((((...........))))(((((.......((((..((((((((.
..((((....))))....))))))))..))))...)))))...)))))).)))))))).)))))))))))...)).))))).)))).))))..
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
