miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

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ABOUT THIS RECORD

ID: MNEST000067
species: Aquilegia formosa x Aquilegia pubescens
miRNA family: MIR1439
source: miRNEST

Taxonomy by NCBI:
Aquilegia formosa x Aquilegia pubescens Aquilegia Ranunculaceae Ranunculales stem eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
ATTTGGGACGGAGGGAGTAAT

miRNA*
TACTCCGTCTGTCCCAAATTG

mismatches: 1
bulges: 0

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pre-miRNA
AAGCTAAGTTATTTTCTGTAATTACTCCGTCTGTCCCAAATTGGTTGTCCTCTATAGAAAATCACATAGATTAAGAAAACATAATTTATTGCACATAAAA
CTAACTACTTTTCCAAATTTACCCTCATTTAATGAATATTTAAGTTTTCTCCACTGCTGTGTTCTAATTTCAAATAAGGGTAAAATGGGAAATAAAGCAA
ATTAATGTAATTAATATGCCCAATGGAAAATGACAATCAATTTAGGACAACAAAAAATGTAATATAGGACAACCAATTTGGGACGGAGGGAGTAATTACA
AAAAATCGGGACGGA


dot-bracket secondary structure
.......((((((((.((((((((((((.((((((((((((((((((((((.(((.((...))..((((((((........))))))))((((.......
....(((.(((((((..((((((((.((((((.((((((...(((.......)))...))))))....)).)))).)))))))).(((........(((.
((((((...)))))).)))))).)))))))(((...)))...)))............))))))).)))))))))))))))))))))).))))))))))))
.)))))...)))...



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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