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ABOUT THIS RECORD
ID:
MNEST000075
species:
Arachis duranensis
miRNA family:
MIR390
source:
miRNEST
Taxonomy by NCBI:
Arachis duranensis
Arachis
Dalbergieae
Papilionoideae
Fabaceae
Fabales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TAGCTCAAGAGGGATAGCGCC
miRNA*
AACGCTATCCATCCTGAGTTTCA
mismatches:
4
bulges:
0
View larger
pre-miRNA
CCTATAGAGTGGAAGAATCTGTA
TAGCTCAAGAGGGATAGCGCC
ACGAAAGCATCGGCGATGATCCGTTGTTTGTGAAGAGTTTTTATGCTCTTTGATTT
TCTGT
AACGCTATCCATCCTGAGTTTCA
TGGGTTCTTCACACTGCTTC
dot-bracket secondary structure
.......(((((((((((((((.
.((((((.((.((((((((.(
(.(((((((.(((((......)))))..)))(((((((......)))))))..)))
).)).
..)))))))).)).))))))..)
)))))))))).)))).....
SIMILARITIES
miRBase
csi-MIR390
:
0.00000003
PMRD
ghr-miR390b
:
0.00000003
microPC
miR390
:
0.0005
UniProt
no hits
RFAM
MIR390: 0.0000001
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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