ABOUT THIS RECORDspecies: Arachis duranensis
miRNA family: MIR166
source: miRNEST
Taxonomy by NCBI:
Arachis duranensis Arachis Dalbergieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCGGACCAGGCTTCATTCCCC miRNA* GGAATGTTGTCTGGCTCGAGA mismatches: 5 bulges: 0 |
pre-miRNA
TGGCTGCTTCTGCTGCAAAGGTTAAGGTTGAGAGGAATGTTGTCTGGCTCGAGAGGTCTTATTAGCTTCATGAATTGTTTGATTTGATGATGATTAGTCA
AAGTGACTAATAATCTCGGACCAGGCTTCATTCCCCCCATCCAACCTTTGCTATATGCTTCTACTT
dot-bracket secondary structure
.((..((.......(((((((((..((.((...((((((..((((((.((((((.(((..(((((...((.....)).)))))..)))....((((((((
...))))))))..)))))).))))))..))))))...)).))))))))))).....))..))....
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TGGCTGCTTCTGCTGCAAAGGTTAAGGTTGAGAGGAATGTTGTCTGGCTCGAGAGGTCTTATTAGCTTCATGAATTGTTTGATTTGATGATGATTAGTCA
AAGTGACTAATAATCTCGGACCAGGCTTCATTCCCCCCATCCAACCTTTGCTATATGCTTCTACTT
dot-bracket secondary structure
.((..((.......(((((((((..((.((...((((((..((((((.((((((.(((..(((((...((.....)).)))))..)))....((((((((
...))))))))..)))))).))))))..))))))...)).))))))))))).....))..))....
SIMILARITIES| miRBase pvu-MIR166a: 0.000000000009 PMRD gma-miR166b: 0.0000000001 microPC miR166: 0.0000005 | UniProt no hits RFAM mir-166: 0.0000002 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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