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ABOUT THIS RECORD
ID:
MNEST000087
species:
Arachis duranensis
miRNA family:
MIRf493
source:
miRNEST
Taxonomy by NCBI:
Arachis duranensis
Arachis
Dalbergieae
Papilionoideae
Fabaceae
Fabales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CTCGGACCACGCTTCATTCCC
miRNA*
GAATGTTGTCTGGCTCGAGAG
mismatches:
5
bulges:
0
View larger
pre-miRNA
TTCTTCTTCTTCTTCATGAGGGAGGTGGTGGCTGCTTCTGCTGCAAAGGTTAAGGTTGAGAG
GAATGTTGTCTGGCTCGAGAG
GTCTTATTAGCTTCATG
AATTGTTTGATTTGATGATGATTAGTCAAAGTGACTAATAAT
CTCGGACCACGCTTCATTCCC
CCCATCCAACCTTTGCTATATGCTTCTGCTTCTGCTT
GCTTCCACTTTCTTTTTAATGT
dot-bracket secondary structure
.................(((((((((((.(((.((....((.(((..(((.(((((((.(((
(((((..((.(((.((((((.
(((..(((((...((..
...)).)))))..)))....((((((((...))))))))..)
))))).))).))..)))))).
....))))))))).)))...)))....))....))..
))).))))))))))).......
SIMILARITIES
miRBase
ptc-MIR166q
:
0.000000003
PMRD
pvu-miR166
:
0.000000003
microPC
miR166
:
0.0002
UniProt
no hits
RFAM
mir-166: 0.0000009
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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