miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Back to search results



ABOUT THIS RECORD

ID: MNEST000103
species: Arachis duranensis
miRNA family: MIR414
source: miRNEST

Taxonomy by NCBI:
Arachis duranensis Arachis Dalbergieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CTATCCTCATCATCATCTTCT

miRNA*
GAGCATGATGAGAAAGGGTTGTT

mismatches: 3
bulges: 2

View larger
pre-miRNA
TTCAATATATGCTATCCTCATCATCATCTTCTTCCTCTATTTCTAAAGATCCTCCAATTTCTTCACCCACTTCTTTCAAAATCCCTAATTCGATTCAATT
TTGGAATCACTGAATCAGCCTTGATTATTATCTGATCTTGATCATGGGAGGTGGAAAGGAGCATGATGAGAAAGGGTTGTTTTCACACC


dot-bracket secondary structure
..........((.(((((..(((((((((((((..(((((((((...((((.(((((.....((...........................)).......
)))))((((...(((((....)))))......))))...))))...))))))))))))))).)))))))...))))).)).........



SIMILARITIES
miRBase osa-MIR164a: 0.0006

PMRD osa-miRf11199-akr: 0.0006

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record





Liczniki na strone;