ABOUT THIS RECORDspecies: Arachis hypogaea
miRNA family: MIR3515
source: miRNEST
Taxonomy by NCBI:
Arachis hypogaea Arachis Dalbergieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AATGTAGAAAATGAACGGTAT miRNA* ACATTTCATTTTCTATACTCA mismatches: 5 bulges: 0 |
pre-miRNA
GAGAATCAATAATGTTATTTCTACATTTCATTTTCTATACTCATTCTCTGCACCTTCCTTTTATGTATGATAAAGGAAAAAATATAAATTTTTCTATTAT
TTTGTCATAAAAGTGAGGTGTAGAGTAAAAATGTAGAAAATGAACGGTATAAATAACATTGATGTTGAG
dot-bracket secondary structure
.....(((((((((((((((.(((..(((((((((((((......(((((((((((.((((((((...(((((.(((((((.......))))))).))))
)....)))))))).)))))))))))......)))))))))))))..))).))))))))))...))))).
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GAGAATCAATAATGTTATTTCTACATTTCATTTTCTATACTCATTCTCTGCACCTTCCTTTTATGTATGATAAAGGAAAAAATATAAATTTTTCTATTAT
TTTGTCATAAAAGTGAGGTGTAGAGTAAAAATGTAGAAAATGAACGGTATAAATAACATTGATGTTGAG
dot-bracket secondary structure
.....(((((((((((((((.(((..(((((((((((((......(((((((((((.((((((((...(((((.(((((((.......))))))).))))
)....)))))))).)))))))))))......)))))))))))))..))).))))))))))...))))).
SIMILARITIES| miRBase ahy-MIR3515: 6e-93 PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
Identical with: ahy-MIR3515 from miRBase (MNEST040417) |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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