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ABOUT THIS RECORD

ID: MNEST000120
species: Arachis hypogaea
miRNA family: MIR162
source: miRNEST

Taxonomy by NCBI:
Arachis hypogaea Arachis Dalbergieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TCGATAAACCTCTGCATCCA

miRNA*
GAGGCAGCGGTTCATCGATC

mismatches: 3
bulges: 0

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pre-miRNA
TTAGCGTATGAATTTGTAAGGTGAAGTCACTGGAGGCAGCGGTTCATCGATCTCTTCCTGAATTTGGCTGTGGAGTCATACACAAAGCAAGAATCGGTCG
ATAAACCTCTGCATCCA
GCGCTCACTTTGCCTCTTTTTCGTGTTTT


dot-bracket secondary structure
...(((...(((...(((((((((.((..(((((.((((.((((.(((((((..(((.((..((((..((((....))))..)))).)).)))..)))))
)).)))).)))).))))
).)))))))))))....))).))).....



SIMILARITIES
miRBase vvi-MIR162: 8e-18

PMRD vvi-miR162: 8e-18

microPC miR162: 2e-31
UniProt no hits

RFAM MIR162_2: 0.00000000004
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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