ABOUT THIS RECORDspecies: Arachis hypogaea
miRNA family: miR166d
source: miRNEST
Taxonomy by NCBI:
Arachis hypogaea Arachis Dalbergieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GGAATGTTGTCTGGCTCGAGA miRNA* TCGGACCAGGCTTCATTCCCC mismatches: 3 bulges: 0 |
pre-miRNA
TAAGGTTGAGAGGAATGTTGTCTGGCTCGAGAGGTCTTATTAGCTTCATGAATTGTTTGATTTGATGATGATTAGTCAAAGTGTCTAATAATCTCGGACC
AGGCTTCATTCCCCCCATCCAA
dot-bracket secondary structure
...((.((...((((((..((((((.((((((....(((((((...(((...(((.((((((.......)))))).))).))).))))))))))))).))
))))..))))))...)).))..
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TAAGGTTGAGAGGAATGTTGTCTGGCTCGAGAGGTCTTATTAGCTTCATGAATTGTTTGATTTGATGATGATTAGTCAAAGTGTCTAATAATCTCGGACC
AGGCTTCATTCCCCCCATCCAA
dot-bracket secondary structure
...((.((...((((((..((((((.((((((....(((((((...(((...(((.((((((.......)))))).))).))).))))))))))))).))
))))..))))))...)).))..
SIMILARITIES| miRBase ptc-MIR166q: 0.000000002 PMRD pvu-miR166: 0.000000002 microPC miR166: 0.0000004 | UniProt no hits RFAM mir-166: 0.0000001 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
