ABOUT THIS RECORDspecies: Arachis hypogaea
miRNA family: MIR156
source: miRNEST
Taxonomy by NCBI:
Arachis hypogaea Arachis Dalbergieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGACAGAAGAGAGAGAGCACA miRNA* TGCTCTCTACTCTTCTGTCATC mismatches: 0 bulges: 1 |
pre-miRNA
ATTATAAATGTTGACAGAAGAGAGAGAGCACAACCCGAGAAATGGTCAAAGAATCTTTTACCTTTGTTGGGAGTGTGCTCTCTACTCTTCTGTCATCATC
TTTAT
dot-bracket secondary structure
.......(((.(((((((((((((((((((((.(((((.(((.(((.((((...)))).)))))).)))))..)))))))))).))))))))))).))).
.....
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
ATTATAAATGTTGACAGAAGAGAGAGAGCACAACCCGAGAAATGGTCAAAGAATCTTTTACCTTTGTTGGGAGTGTGCTCTCTACTCTTCTGTCATCATC
TTTAT
dot-bracket secondary structure
.......(((.(((((((((((((((((((((.(((((.(((.(((.((((...)))).)))))).)))))..)))))))))).))))))))))).))).
.....
SIMILARITIES| miRBase ahy-MIR156c: 6e-55 PMRD ahy-miR157k: 6e-55 microPC miR157: 5e-43 | UniProt no hits RFAM mir-156: 0.0000000000001 | most similar mature miRNAs |
Identical with: miR156 from microPC (MNEST046790) |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
