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ABOUT THIS RECORD
ID:
MNEST000144
species:
Arachis ipaensis
miRNA family:
MIR2673
source:
miRNEST
Taxonomy by NCBI:
Arachis ipaensis
Arachis
Dalbergieae
Papilionoideae
Fabaceae
Fabales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CCTCTTCCTCTTCCTCTCCCT
miRNA*
CAGAAGAGGAGAAAGGAGGA
mismatches:
4
bulges:
1
View larger
pre-miRNA
AGTTTTGAAACACTGAGGAGAG
CAGAAGAGGAGAAAGGAGGA
GCAATAAGAAAACCTGCTATGAACAAAGCATGGAAACAAGAAGAAGATAGGTGCTGTT
GTGTATTGTTACACAGAAGCTCAAAGGCGTGAGCTTCGTCATCAAGTTCTTACCTTCGACTACTTTGCTTATAATCTC
CCTCTTCCTCTTCCTCTCCCT
C
TCCCTCACCCTCATCATC
dot-bracket secondary structure
.(((....)))..(((((((((
.(((.((((((.((((.(((
(..(((((.(((..((((........))))((....))((..((((.((((.(((..(
(((((....))))))((((((((......)))))))).......))).)))).))))..))..))).)))))...)))
).)))).)))))).)))..))
)
).)))))...........
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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