ABOUT THIS RECORDspecies: Arachis ipaensis
miRNA family: MIR390
source: miRNEST
Taxonomy by NCBI:
Arachis ipaensis Arachis Dalbergieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AAACTCAGGAGGGATAGCGCC miRNA* CGCTATCTATCCAGAGTTTCA mismatches: 2 bulges: 0 |
pre-miRNA
ATTAATAAGGTAGAATCTGTTAAACTCAGGAGGGATAGCGCCACATATAACACAATTCATTCGTATTGGCGCTATCTATCCAGAGTTTCACGGCTTCTTC
TTACTTTA
dot-bracket secondary structure
.....(((((.((((.((((.((((((.(((.(((((((((((.((((..............))))))))))))))).))).)))))).)))).))))))
))).....
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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ATTAATAAGGTAGAATCTGTTAAACTCAGGAGGGATAGCGCCACATATAACACAATTCATTCGTATTGGCGCTATCTATCCAGAGTTTCACGGCTTCTTC
TTACTTTA
dot-bracket secondary structure
.....(((((.((((.((((.((((((.(((.(((((((((((.((((..............))))))))))))))).))).)))))).)))).))))))
))).....
SIMILARITIES| miRBase vvi-MIR390: 0.000000005 PMRD vvi-miR390: 0.000000005 microPC miR390: 0.0003 | UniProt no hits RFAM MIR390: 0.00000002 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
