miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

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ABOUT THIS RECORD

ID: MNEST000160
species: Aristolochia fimbriata
miRNA family: MIR2004
source: miRNEST

Taxonomy by NCBI:
Aristolochia fimbriata Aristolochia Aristolochiaceae Piperales magnoliids Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTTGTTTTTATTTTATTTTTT

miRNA*
AAAGTAACCGGAAACGAATT

mismatches: 2
bulges: 1

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pre-miRNA
ACAGTTAGCGAAAAAGTAACCGGAAACGAATTTGAGTGAAAAACCTTCTATTTGGAGCAAAACAATGATCCAAATAAATGGGATGTTCATCATTTAGAGC
TCTTAAGGGTTGGGCATGCTGACCTATGTGATTATTTGCGACGAAAGGGCTTGTAGATGTTTTGTACTCTTGTCAGAAATGTTAATTTTTGTTTTTATTT
TATTTTTT
CCAGTATAA


dot-bracket secondary structure
.........((((((((((..(((((((((...(((((.(((((..((((((((((.((......)).))))))(((((((........)))))))((((
((((..(((((((.....))))))).(((((....)))))....)))))))).)))).))))).)))))(((.((....)).)))..)))))))))...)
))))))))
)........



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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