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ABOUT THIS RECORD

ID: MNEST000163
species: Avena barbata
miRNA family: MIRf341
source: miRNEST

Taxonomy by NCBI:
Avena barbata Avena Aveninae Poeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
AGTACTCCCTCCGATCCTAAA

miRNA*
TAGGATCAGAGGGAGTGGTAT

mismatches: 4
bulges: 0

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pre-miRNA
TTTGAAATACTAGTACTCCCTCCGATCCTAAATAAATGTCGCAGTTTTGAACTAACTCTATTTAGGATCAGAGGGAGTGGTATTTTTGTGT

dot-bracket secondary structure
...((((((((...((((((((.(((((((((((...((...((((...)))).))..))))))))))).)))))))))))))))).....


SIMILARITIES
miRBase bdi-MIR5180a: 0.00000002

PMRD no hits

microPC no hits
UniProt no hits

RFAM MIR1122: 0.000001
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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