ABOUT THIS RECORDspecies: Avena barbata
miRNA family: MIRf1286
source: miRNEST
Taxonomy by NCBI:
Avena barbata Avena Aveninae Poeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CGGTGAACTCCTTTTCTTCGT miRNA* GGCGAAAGGGGCTACGCCGAG mismatches: 4 bulges: 0 |
pre-miRNA
TTTTAACGATAATTGAAGCCCCGGTGAACTCCTTTTCTTCGTTGGTTGCAACCCTCGGCGTAGCGTATGCCGACGGCGAAAGGGGCTACGCCGAGGGCTT
TTTGCCGTCGGCC
dot-bracket secondary structure
..............((((((((((((...((((((((.(((((((((((.((.......)).)))...)))))))).))))))))...))))).))))))
)..(((...))).
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TTTTAACGATAATTGAAGCCCCGGTGAACTCCTTTTCTTCGTTGGTTGCAACCCTCGGCGTAGCGTATGCCGACGGCGAAAGGGGCTACGCCGAGGGCTT
TTTGCCGTCGGCC
dot-bracket secondary structure
..............((((((((((((...((((((((.(((((((((((.((.......)).)))...)))))))).))))))))...))))).))))))
)..(((...))).
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
