miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Back to search results



ABOUT THIS RECORD

ID: MNEST000191
species: Avena barbata
miRNA family: MIR414
source: miRNEST

Taxonomy by NCBI:
Avena barbata Avena Aveninae Poeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TCATCATCATCATCATCCTCA

miRNA*
AGGCTGTCGATGATGGTGGTC

mismatches: 4
bulges: 0

View larger
pre-miRNA
TCATCATCATCGTCACCATCATCATCATCATCATCATCCTCATCCTCATCCTCCTCCTCCATAATTGATGATTCGAAACGCGCCCAAGCACCGTCTAAAT
ATAGTTCTTGAGTGAGCGACGTGTTTCTCTTCTTCTTCCTGGTCACTATCTCGATGTCAGGAACATGAAGTAGATGTATATCGTTACATTAAAAAGAACA
GAATGATCCTACTGCACTTGTGGATGGGGGGAGACGGAGTGGAGGTGGAGGTGGAGTCAGAGGCTGTCGATGATGGTGGTCGAAGTATGGTGACAAAAC


dot-bracket secondary structure
...........(((((((((((((((((((((..((.((((...(((..(((((.(((((((..((((....))))...((......)).((((((...(
((.((((((.(((((((((.((((.(((((((...(((((((((........))..)))))))...)))).))).)))).))))).))))...)))))).
..))).(((((((((....)))).)))))..)))))).))))))).)))))..)))...)))).))..)))))))))))).))....))))))).....



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record





Liczniki na strone;