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ABOUT THIS RECORD

ID: MNEST000207
species: Barnadesia spinosa
miRNA family: MIR482
source: miRNEST

Taxonomy by NCBI:
Barnadesia spinosa Barnadesia Barnadesioideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
ACTTCCCAATTCCGCCCTTCA

miRNA*
AGGTGGTGGAATCGGAGAGTTT

mismatches: 3
bulges: 1

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pre-miRNA
CGTTGGAAGGAGAGGTGGTGGAATCGGAGAGTTTCAAGGATCAGATGAAGCTCCTTTAGAAAACAATCTAGAAGAATATAGGCTCAATATCGACACTTCC
CAATTCCGCCCTTCA
CACGTGAAC


dot-bracket secondary structure
..((....)).((((.((((((((.((.((((.((........((((.(((((.((((((......)))))).))......)))...)))))).)))).)
).)))))))))))).
.........



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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