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ABOUT THIS RECORD

ID: MNEST000333
species: Brassica rapa
miRNA family: MIR2673
source: miRNEST

Taxonomy by NCBI:
Brassica rapa Brassica Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CCTCTTCCTCTTCCTCTTCCT

miRNA*
GAAGAAGAAGAGTGAAGAGTGAA

mismatches: 2
bulges: 2

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pre-miRNA
GGACAGAAGAAGAAGAAGAGTGAAGAGTGAAGCTCCTCCTCTCGAACAACAACAATGGCGACAATGGCTGCAATCGGATCCTTAAAAGTCCCTTCCTCTT
CCTCTTCCTCTTCCT
CGAACCACA


dot-bracket secondary structure
((...((.(((((.((((((.((((((.(((((.((.....(((..((.......)).)))....))..))....((((........)))).))))))))
))))))).))))).)
)...))...



SIMILARITIES
miRBase mtr-MIR2673b: 0.000006

PMRD no hits

microPC no hits
UniProt no hits

RFAM 7SK: 0.000007
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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