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ABOUT THIS RECORD
ID:
MNEST000354
species:
Cichorium intybus
miRNA family:
MIR414
source:
miRNEST
Taxonomy by NCBI:
Cichorium intybus
Cichorium
Cichoriinae
Cichorieae
Cichorioideae
Asteraceae
Asterales
campanulids
asterids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
ACGTCATCATCATCATCTTCG
miRNA*
AGGATCATGATATGATTCAT
mismatches:
4
bulges:
1
View larger
pre-miRNA
AAATGGGATCGG
AGGATCATGATATGATTCAT
AATAAAAATAAAGATAGGTTTTCGTCTTCA
ACGTCATCATCATCATCTTCG
CACTGTAAC
dot-bracket secondary structure
...........(
(((((.((((((((((....
.((.(((((........))))).)).....
..))))).))))).)))))).
.........
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
mir-598: 0.0003
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
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