ABOUT THIS RECORDspecies: Citrus aurantium
miRNA family: MIRf591
source: miRNEST
Taxonomy by NCBI:
Citrus aurantium Citrus Rutaceae Sapindales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GGCAAGTCATCCTTGGCTAGA miRNA* TAGCAAGGATGCTTGCCCA mismatches: 0 bulges: 2 |
pre-miRNA
TGAAAATAAGAGCTGGTCAGTTTAGCAAGGATGCTTGCCCAAGCATATACCACAAAAGGGATCTTAGCTAGTTAAGTAGAAACCCACTTGTGTGTGTGTG
TATGCATACATGCATTCACTTCCAAAACCCCAAAAATGGTTGATATAGGCAAGTCATCCTTGGCTAGAAAACTAGCTCTTCATCTCC
dot-bracket secondary structure
.......((((((((((...(((((((((((((((((((...(((((((((((((..(((.(((..(((.....))))))..)))..))))).)))))))
).((((....)))).(((...(((............))).)))....)))))).))))))).))))))..)))))))))).......
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
TGAAAATAAGAGCTGGTCAGTTTAGCAAGGATGCTTGCCCAAGCATATACCACAAAAGGGATCTTAGCTAGTTAAGTAGAAACCCACTTGTGTGTGTGTG
TATGCATACATGCATTCACTTCCAAAACCCCAAAAATGGTTGATATAGGCAAGTCATCCTTGGCTAGAAAACTAGCTCTTCATCTCC
dot-bracket secondary structure
.......((((((((((...(((((((((((((((((((...(((((((((((((..(((.(((..(((.....))))))..)))..))))).)))))))
).((((....)))).(((...(((............))).)))....)))))).))))))).))))))..)))))))))).......
SIMILARITIES| miRBase sbi-MIR169n: 0.0000006 PMRD sbi-miR169n: 0.0000006 microPC miR169: 0.0000006 | UniProt no hits RFAM MIR169_5: 0.000003 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
