ABOUT THIS RECORDspecies: Citrus sinensis
miRNA family: MIRf99
source: miRNEST
Taxonomy by NCBI:
Citrus sinensis Citrus Rutaceae Sapindales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GGAACTGAACCGAACTGAAGC miRNA* TTTCNCTGGTGGAGTTTCAA mismatches: 5 bulges: 1 |
pre-miRNA
GTATAGAACATGGAACTGAACCGAACTGAAGCCGAACTGCTTTACTNTGAATGGGGCTTTCNCTGGTGGAGTTTCAATGNGCTTT
dot-bracket secondary structure
((.....)).(((((((..((((....((((((.....................))))))...))))..))))))).........
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
Source sequences
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GTATAGAACATGGAACTGAACCGAACTGAAGCCGAACTGCTTTACTNTGAATGGGGCTTTCNCTGGTGGAGTTTCAATGNGCTTT
dot-bracket secondary structure
((.....)).(((((((..((((....((((((.....................))))))...))))..))))))).........
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
Source sequences
download this record
