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ABOUT THIS RECORD

ID: MNEST000399
species: Citrus sinensis
miRNA family: MIRf917
source: miRNEST

Taxonomy by NCBI:
Citrus sinensis Citrus Rutaceae Sapindales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GCTCTCTCTCTTCTGTCAAAT

miRNA*
GGCATGGATGGATGGCCA

mismatches: 5
bulges: 1

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pre-miRNA
CATATGGTTGGTGGCATGGATGGATGGCCAGTGACAAGTGTCTCCAAGCAGGTATCTGGAAATCAAACCACTGTCACAGCAAGGCATCTTCCTCAGCCAC
TATGGCAAAACCACTCTCAGGATCCTCCACCTGATCGTTACCTTCAGTGTTCAACAGCTGGGACTGGTTTCTCTGGTCCTGGAATTCCTTGTGGAGGATG
CTTCACAGGAGTTGCTGAACTCAAACTGTGCTCTCTCTCTTCTGTCAAATCAACCATGG


dot-bracket secondary structure
..((((((((((((((.(((.(((.(((..((((((.(((..((((..........))))........)))))))))....(((((((((((...((((.
..))))......((....((((...((((...(((((..(((.(((((........)))))....))).....))))).))))..)))).))))))))))
))).(((((((((....)))))...))))))).))).)))..)))))..))))))))).



SIMILARITIES
miRBase far-MIR529: 0.0000002

PMRD gra-miR157d: 0.00000000006

microPC miR157: 0.00005
UniProt no hits

RFAM mir-156: 0.001
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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