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ABOUT THIS RECORD

ID: MNEST000401
species: Citrus sinensis
miRNA family: MIR1023
source: miRNEST

Taxonomy by NCBI:
Citrus sinensis Citrus Rutaceae Sapindales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
AGAGAATGGGAGAGAGTGCGT

miRNA*
GCAATCTCCCCTGCTCGCC

mismatches: 4
bulges: 2

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pre-miRNA
AGGACCTCCTCTGATGCTGAACGCAATCTCCCCTGCTCGCCGGCGCGTGGGCGTGAAGCACCCGGGTGGTGAATGCGTTACGCGTTGGGAATACACTTCC
CGCTTATGCCGCGGAGGCTGCCAAAGATGCGAGGGTGGAACGTGGGCGTCTCATGGGGAGTGGGGGGACGCGGGGGGAAGAATCCGAAAGAGAATGGGAG
AGAGTGCGT
GGCCGGGGGTCCCGGCGGC


dot-bracket secondary structure
.((((((((......(((..(((((.(((((((..(((.(((((((((((((((....((((.....)))).)))).))))))))))).......(((((
(((((...(((..(((((.(((.....(((....))).......)))))))).))).))))))))))...((((........))))...)))...))).)
))).)))))
))).)))))))).......



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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