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ABOUT THIS RECORD

ID: MNEST000449
species: Citrus unshiu
miRNA family: MIR156
source: miRNEST

Taxonomy by NCBI:
Citrus unshiu Citrus Rutaceae Sapindales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGACAGAAGAGAGAGAGCACA

miRNA*
TGTTTTTTTTTTTTTTTTTTA

mismatches: 3
bulges: 0

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pre-miRNA
ACGGCATGACAGTGTTTTTTTTTTTTTTTTTTAACAACAAACCAACATTCTAGTCTTGAGAATAAGTTCATTGCAGCAGGATTTTCAAGAAGAGAATCCA
GAATTATTATATGGAAAGATAACAACCTCTTAGTGACTTACTACTCCCAATGAAAGGGAATTGTTTGAGGGGTATCACTGGCTGCGGACCCATCATATCC
CAAATGAAACACTCCAGGGCAATGAACATTATCATCCTGATCACTGGATACCAGAACAGATTCCATGGGCTCTACACTGTGATTATGCAGGCTTGTGCCC
AAGGACCGCACCAGTGGCATTGAACTAGGCGGCATCATTTGGCTCAAACTGATACCAGATGTCTGTGTTGTTGGTGATGACAGAAGAGAGAGAGCACAAT
CTGAGTC


dot-bracket secondary structure
..(((..((..((((((((((((((((.((..........(((((((((((.......))))..((((((.(((....((((((((.....)))))))).
...(((((.........)))))..((((((((..(((.......((((.......))))...)))))))))))..((((((.(((((.....((((....
...)))).......(((((...(((......))))))))(((.((((...))))....)))(((.(((((......((((......))))......))))
).))))))))))))))))).))))))..((((...(((((((.(((...)))..))))))).))))..)))))))...)).))))))))))))))))..)
)...)))



SIMILARITIES
miRBase sbi-MIR156d: 0.0000003

PMRD csi-miR156b: 0

microPC miR157: 0.00009
UniProt no hits

RFAM mir-156: 0.0004
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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