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ABOUT THIS RECORD

ID: MNEST000454
species: Citrus unshiu
miRNA family: MIR408
source: miRNEST

Taxonomy by NCBI:
Citrus unshiu Citrus Rutaceae Sapindales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
ATGCACTGCCTCTTCCCTGGC

miRNA*
CGGGGAACAGGCAGAGCATGG

mismatches: 4
bulges: 0

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pre-miRNA
AGACAAAAGACGGGGAACAGGCAGAGCATGGATGGAACCATTAACAGGTTCTCTGTTTTGGCTCCTCCCATGCACTGCCTCTTCCCTGGCTCTCTGC

dot-bracket secondary structure
..........(((((((.((((((.((((((..(((.(((..((((((...)))))).))).)))..)))))).)))))).))))))).........


SIMILARITIES
miRBase csi-MIR408: 3e-50

PMRD cpt-miR408: 3e-50

microPC miR408: 5e-18
UniProt no hits

RFAM MIR408: 2e-17
most similar mature miRNAs

Identical with: csi-MIR408 from miRBase (MNEST041252)

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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