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ABOUT THIS RECORD
ID:
MNEST000457
species:
Citrus unshiu
miRNA family:
MIR408
source:
miRNEST
Taxonomy by NCBI:
Citrus unshiu
Citrus
Rutaceae
Sapindales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CGGGGAACAGGCAGAGCATGG
miRNA*
ATGCGCTGCCTCTTCCCTGGC
mismatches:
2
bulges:
0
View larger
pre-miRNA
GAGACAAAAGA
CGGGGAACAGGCAGAGCATGG
ATGGAACCATTAACAGGTTCTCTGTTTTGGCTCCTCCC
ATGCGCTGCCTCTTCCCTGGC
TCTCTGCC
dot-bracket secondary structure
((((.......
(((((((.((((((.((((((
..(((.(((..((((((...)))))).))).)))..))
)))).)))))).)))))))..
))))....
SIMILARITIES
miRBase
csi-MIR408
:
5e-49
PMRD
cpt-miR408
:
2e-48
microPC
miR408
:
0.000000000000001
UniProt
no hits
RFAM
MIR408: 0.000000000000006
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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