miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

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ABOUT THIS RECORD

ID: MNEST000462
species: Coccomyxa sp. C-169
miRNA family: MIRf60
source: miRNEST

Taxonomy by NCBI:
Coccomyxa sp. C-169 Coccomyxa Coccomyxaceae Trebouxiophyceae incertae sedis Trebouxiophyceae Chlorophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GGCGTCACGTGACGCCTGGGC

miRNA*
CCAGGCCTCATCAGGGCGTCTA

mismatches: 4
bulges: 1

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pre-miRNA
AGGAACCAGCCAACAAATGTAGGCGTCACGTGACGCCTGGGCTTTGTGATTAGGGGACATGGGTTTACCCATGCCCTCACGGTGGCGAGGAATATCATGC
CCTTGGCACGATTGCCCTCTGTCTCCTTAATCACGCCCCAGGCCTCATCAGGGCGTCTATATTTCATTTTATTTTAT


dot-bracket secondary structure
.((......))...(((((((((((((..((((.(((((((...((((((((((((((.((((....)))).(((((...)).)))((((...(((.(((
(...)))).)))...)))).))).))))))))))).))))))).))))...))))))))))))).............



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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