miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Back to search results



ABOUT THIS RECORD

ID: MNEST000463
species: Coffea canephora
miRNA family: MIRf345
source: miRNEST

Taxonomy by NCBI:
Coffea canephora Coffea Coffeeae Ixoroideae Rubiaceae Gentianales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CACCAAAGGCCTCTGCCCTTC

miRNA*
AGGGCGGAGCTTTTGGTTTT

mismatches: 1
bulges: 1

View larger
pre-miRNA
ACTGGGGGGGACACCAAAGGCCTCTGCCCTTCCATCCCTTAAATAGAGAGGGAGGGCGGAGCTTTTGGTTTTTTCATGTT

dot-bracket secondary structure
......(((((.(((((((((.(((((((((((.((.((.....)).)))))))))))))))))))))).))))).....


SIMILARITIES
miRBase no hits

PMRD ptc-miRf12309-akr: 0.000000000000001

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record





Liczniki na strone;