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ABOUT THIS RECORD

ID: MNEST000493
species: Cucumis melo subsp. melo
miRNA family: MIR157
source: miRNEST

Taxonomy by NCBI:
Cucumis melo subsp. melo Cucumis melo Cucumis Cucurbitaceae Cucurbitales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGACAGAAGATAGAGAGCAC

miRNA*
GCTCTCTATGCTTCTGTCATC

mismatches: 0
bulges: 1

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pre-miRNA
ATATATGTTGTTGACAGAAGATAGAGAGCACAGATGATGATATGCAAAAATTTCATCAATCATTATTATTAATATCATTCTTTGTTTTTTAGGGTTTAGA
ACTTTAGAGAGAGACATTATTATCCTTATCACTATGCATTTCACTCCATTTGTGCTCTCTATGCTTCTGTCATCACTCTCTT


dot-bracket secondary structure
........((.(((((((((((((((((((((((((.(((.(((((.................((....((((.((.(((((((..(((((.....))))
)...))))))).)).)))).))............))))).)))...)))))))))))))))).))))))))).)).......



SIMILARITIES
miRBase ptc-MIR156j: 1e-17

PMRD ptc-miR156j: 1e-17

microPC miR157: 1e-88
UniProt no hits

RFAM no hits
most similar mature miRNAs

Identical with: miR156 from microPC (MNEST045352)

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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