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ABOUT THIS RECORD

ID: MNEST000498
species: Cucumis melo subsp. melo
miRNA family: MIR414
source: miRNEST

Taxonomy by NCBI:
Cucumis melo subsp. melo Cucumis melo Cucumis Cucurbitaceae Cucurbitales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TCATCATCATCATCATCTTCA

miRNA*
GAGATGATGAATGGTCCTT

mismatches: 2
bulges: 2

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pre-miRNA
CATCATCATCATCATCATCATCATCATCTTCATCATCATCATAGTGAAGTAAAATAGATGACCGTCGCTGAAAGGTTGTTTTGATTCAATCAAACAATTT
CATTCAACTCATTTTCTCCAACTCTCTGAAACATTCATTGCATTCATTGCCGCAATCAAGTTTCAGGTGGGAAAATCGGTCGTAGATTTAGGGTTAGGTT
GATTGTTTTTGTTCTCAAATTCTCAAAGAAGAGGAGGAAGAGGAAGAGGAAGACTAGGTTTACGGGTTAGGGTTTTGGTTTTGCGTTTTTCTTGAAAAAT
GACTGACGTGATACTGCATATATACGACGTTACGAATAGCGGATCAGATAAGACCAATAATACAATTGTTAATATCAACAAGATCTTCAAGGATGGAAAT
GGTCTAGGCGGTATCTTCCATAGCGCTGTTCAGGTTTATGGAGATGATGAATGGTCCTTCGGGTTTT


dot-bracket secondary structure
.............(((((..(((((((((((((.(((...((((((.........((((.((((((..(((((((((((((.(((...))))))))))))
..))))(((.((((((.(((....((((((((.((.(((((..........))))).))))))))))))))))))).)))(((((((((((..((.....
..((.(((((.(((((...((((...))))...))))).))))).)).))...))))))))))).((((.((((((((((...(((((((....))))))
)...))).((((.((((...(((.((......)).)))))))))))..)))))))..))))....(((((......))))).((((....))))(((...
..))).)))))))))).......))))))...)))..))))))))))))))))))((....))....



SIMILARITIES
miRBase mtr-MIR2673a: 0.0004

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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