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ABOUT THIS RECORD
ID:
MNEST000526
species:
Cynodon dactylon
miRNA family:
MIR156
source:
miRNEST
Taxonomy by NCBI:
Cynodon dactylon
Cynodon
Eleusininae
Cynodonteae
Chloridoideae
PACCAD clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGACAGAAGAGAGTGAGCACA
miRNA*
TGCTCGCTCCTCTTTCTGTCAGC
mismatches:
2
bulges:
2
View larger
pre-miRNA
CTTATACGGCCCTGGAGAGAT
TGACAGAAGAGAGTGAGCACA
CGGGGCGGCGGTCGGCACTGGACGTGTGTCGTCCCCGCCGCG
TGCTCGCTCCTCTTTC
TGTCAGC
CTCTCTCTTGTCCAAGGC
dot-bracket secondary structure
.......(((...((((((((
(((((((((.((((((((((.
....(((((((.((((((.......))))))...))))))))
)))))))))...))))
)))))).
.))))))).)))......
SIMILARITIES
miRBase
sbi-MIR156e
:
8e-27
PMRD
sbi-miR156e
:
8e-27
microPC
miR156
:
0.000000006
UniProt
no hits
RFAM
mir-156: 0.00000000000003
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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