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ABOUT THIS RECORD

ID: MNEST000527
species: Cynodon dactylon
miRNA family: MIR1439
source: miRNEST

Taxonomy by NCBI:
Cynodon dactylon Cynodon Eleusininae Cynodonteae Chloridoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTTTGGGACGGAGGGAGTATT

miRNA*
 TACTCCCTCCGTTCCATTATA

mismatches: 4
bulges: 0
View larger
pre-miRNA
 TGGAAGTTGTCTCATCAACGCTAAATTTATGCTACTCCCTCCGTTCCATTATAATTGGCATTCTAGCCCTGAGCACGAAGATTAAGAAGAGAAGGAATAA
AGTAGATGCGCAGGAAACGAGGAAGAGAGAGATAGAGATAGAGATGTATTGGGAAGAGAGAGAGAATGACAATTATTTTGGAAAAACTGGAGATGGCTAG
AATGTCAATTATTTTGGGACGGAGGGAGTATTGTCTAATTTTAGCTTTGATCTCTGAACTG

dot-bracket secondary structure
.(((.....))).(((((.((((((.(((.((((((((((((((((((..(((((((((((((((((((((.(((.........................
......))).))))...((...............(((((((...(((.....................))).)))))))..............)))))))
))))))))))))..))))))))))))))))..)).))).)))))).)))))..........


SIMILARITIES
miRBase osa-MIR1862e: 0.00001

PMRD hpr-miR1120: 0.000003

microPC miR1439: 0.0000009		UniProt no hits

RFAM MIR1122: 0.000004		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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