miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Back to search results



ABOUT THIS RECORD

ID: MNEST000530
species: Cynodon dactylon
miRNA family: MIR812
source: miRNEST

Taxonomy by NCBI:
Cynodon dactylon Cynodon Eleusininae Cynodonteae Chloridoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTGAATAAGACGAATGATCAA

miRNA*
 GATCCTTCGTCTTATTTAAAA

mismatches: 1
bulges: 0
View larger
pre-miRNA
 TAGTATGTGTTACTCCCTCCGTCCGAAAATATAAGCATTTATTGATTTTTAGATATCATTTTTGATCCTTCGTCTTATTTAAAAAATTTGTAAAATATAA
AATTAAATAAGTCATATTTAAAGTATATCTAATGATAAAGTTGACTATAATAAAATTAATAATAATTTTATAACTATTTTGAATAAGACGAATGATCAAA
CATAAAATTCAAAAGTCAACAAATACTTATATTTCTGGACAAAGGGAGTACTCTGCTCG

dot-bracket secondary structure
.((((...((.(((((((..(((((.(((((((((.((((.(((((((((.(((...((.(((((((.((((((((((((((((...(((((((((....
.(((((...(((((..((((...(((.....))).))))..))))).........)))))....)))))))))...)))))))))))))))).)))))))
.))...))).))))))))).)))).))))))))).)))))..)))))))))..))))..


SIMILARITIES
miRBase osa-MIR1884a: 0.0000009

PMRD osa-miRf10603-akr: 0.0000002

microPC miR1128: 0.00005		UniProt no hits

RFAM MIR812: 0.00000000000007		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record




Liczniki na strone;