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ABOUT THIS RECORD
ID:
MNEST000534
species:
Cynodon dactylon
miRNA family:
miR164c
source:
miRNEST
Taxonomy by NCBI:
Cynodon dactylon
Cynodon
Eleusininae
Cynodonteae
Chloridoideae
PACCAD clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CATGTGCCCTTCTTCTCCATC
miRNA*
TGGAGAAGCAGGGCACGTGCT
mismatches:
1
bulges:
0
View larger
pre-miRNA
TGGAGGATGGCGAGGTGCGCGAGG
TGGAGAAGCAGGGCACGTGCT
TGCTTGCTTGCCCCTTCTCTAGCCGGTTTAGCATTCCGGCCGGCCGGCAGCGATC
GAGCGAAAGGCTTGGTCGCCGGCCGTCAGGCTTGCTAGCTCATGGAGCCAGCTGATG
CATGTGCCCTTCTTCTCCATC
GTGCATGCCTCGCCTGCGCAT
dot-bracket secondary structure
........(((((((((.(((.((
((((((((.(((((((((((.
.....(((.((.((....(((((.(((((.((......))((((((((...((((
((((.....))))))))))))))))..))))).))))).....)).)).)))....)
)))))))))).))))))))))
.))).))))))))).......
SIMILARITIES
miRBase
osa-MIR164f
:
0.00000000000001
PMRD
osa-miR164f
:
0.00000000000001
microPC
miR164
:
0.0006
UniProt
no hits
RFAM
MIR164: 0.00000001
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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