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ABOUT THIS RECORD

ID: MNEST000544
species: Dioscorea alata
miRNA family: MIR156
source: miRNEST

Taxonomy by NCBI:
Dioscorea alata Dioscorea Dioscoreaceae Dioscoreales Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGACAGAAGAGAGAGAGCATG

miRNA*
TGCTATTAACTAGTGTCGCA

mismatches: 5
bulges: 1

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pre-miRNA
AAAGTATCATTAGCAGCAGGCATGCTATTAACTAGTGTCGCAGGGCAACCCAAATATGTTTTTATACATATGTTTCTAGAGAACATAAGCCACAGGATGA
CAGAAGAGAGAGAGCATG
CTATGTAGCTTATCTGATC


dot-bracket secondary structure
.....((((..(((.(((((((((((.((..((..(((((...(((........(((((((((...............))))))))).)))......)))
))..))..))..))))))
)).))).)))....)))).



SIMILARITIES
miRBase vvi-MIR156h: 0.000002

PMRD vvi-miR156h: 0.000002

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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