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ABOUT THIS RECORD
ID:
MNEST000544
species:
Dioscorea alata
miRNA family:
MIR156
source:
miRNEST
Taxonomy by NCBI:
Dioscorea alata
Dioscorea
Dioscoreaceae
Dioscoreales
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGACAGAAGAGAGAGAGCATG
miRNA*
TGCTATTAACTAGTGTCGCA
mismatches:
5
bulges:
1
View larger
pre-miRNA
AAAGTATCATTAGCAGCAGGCA
TGCTATTAACTAGTGTCGCA
GGGCAACCCAAATATGTTTTTATACATATGTTTCTAGAGAACATAAGCCACAGGA
TGA
CAGAAGAGAGAGAGCATG
CTATGTAGCTTATCTGATC
dot-bracket secondary structure
.....((((..(((.(((((((
((((.((..((..(((((..
.(((........(((((((((...............))))))))).)))......
)))
))..))..))..))))))
)).))).)))....)))).
SIMILARITIES
miRBase
vvi-MIR156h
:
0.000002
PMRD
vvi-miR156h
:
0.000002
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
download this record